Found 227 results
2017
Mukherjee S, Seshadri R, Varghese NJ, Eloe-Fadrosh EA, Meier-Kolthoff JP, Göker M, R Coates C, Hadjithomas M, Pavlopoulos GA, Paez-Espino D et al..  2017.  1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Nature Biotechnology. 35(7):676-683.
Varelias A, Ormerod KL, Bunting MD, Koyama M, Gartlan KH, Kuns RD, Lachner N, Locke KR, Lim CY, Henden AS et al..  2017.  Acute graft-versus-host disease is regulated by an IL-17-sensitive microbiome. Blood.
Deng J, McCalley CK, Frolking S, Chanton J, Crill P, Varner R, Tyson GW, Rich V, Hines M, Saleska SR et al..  2017.  Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling. Journal of Advances in Modeling Earth Systems. 9(2):1412-1430.
Pedroso MMonteiro, Selleck C, Enculescu C, Harmer JR, Mitić N, Craig WR, Helweh W, Hugenholtz P, Tyson GW, Tierney DL et al..  2017.  Characterization of a highly efficient antibiotic-degrading metallo-β-lactamase obtained from an uncultured member of a permafrost community. Metallomics. 9(8):1157-1168.
Hugenholtz P, Waite DW, Vanwonterghem I, Rinke C, Parks DH, Zhang Y, Takai K, Sievert SM, Simon J, Campbell BJ et al..  2017.  Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.). Frontiers in Microbiology. 8
Raudsepp MJ, Gagen EJ, Golding SD, Tyson GW, Southam G.  2017.  The effect of bituminous coal on methanogenic mixed cultures and pure cultures of Methanococcus and Methanosarcina. Fuel. 205:60-70.
Yeoh YKit, Dennis PG, Paungfoo-Lonhienne C, Weber L, Brackin R, Ragan MA, Schmidt S, Hugenholtz P.  2017.  Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence. Nature Communications. 8(1)
Skennerton CT, Chourey K, Iyer R, Hettich RL, Tyson GW, Orphan VJ.  2017.  Methane-Fueled Syntrophy through Extracellular Electron Transfer: Uncovering the Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic Methanotrophic Archaea. mBio. 8(4):e00530-17.
Chotirmall SH, Gellatly SL, Budden KF, Aogáin MMac, Shukla SD, Wood DLA, Hugenholtz P, Pethe K, Hansbro PM.  2017.  Microbiomes in respiratory health and disease: An Asia-Pacific perspective. Respirology. 22(2):240-250.
Lambert BS, Raina J-B, Fernandez VI, Rinke C, Siboni N, Rubino F, Hugenholtz P, Tyson GW, Seymour JR, Stocker R.  2017.  A microfluidics-based in situ chemotaxis assay to study the behaviour of aquatic microbial communities. Nature Microbiology.
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA et al..  2017.  Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 35(8):725-731.
Soo RM, Hemp J, Parks DH, Fischer WW, Hugenholtz P.  2017.  On the origins of oxygenic photosynthesis and aerobic respiration in Cyanobacteria. Science. 355(6332):1436-1440.
Parks DH, Rinke C, Chuvochina M, Chaumeil P-A, Woodcroft B.J., Evans PN, Hugenholtz P, Tyson GW.  2017.  Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life. Nature Microbiology.
2016
Simpson JL, Daly JN, Baines KJ, Yang IA, Upham JW, Reynolds PN, Hodge S, James AL, Hugenholtz P, Willner D et al..  2016.  Airway dysbiosis: Haemophilus influenzae and Tropheryma in poorly controlled asthma. European Respiratory Journal. 47(3):792-800.
Leong LEX, Denman SE, Hugenholtz P, McSweeney CS.  2016.  Amino Acid and Peptide Utilization Profiles of the Fluoroacetate-Degrading Bacterium Synergistetes Strain MFA1 Under Varying Conditions. Microbial Ecology. 71(2):494-504.
Dennis PG, Virdis B, Vanwonterghem I, Hassan A, Hugenholtz P, Tyson GW, Rabaey K.  2016.  Anode potential influences the structure and function of anodic electrode and electrolyte-associated microbiomes. Scientific Reports. 6(1)
Ikeda-Ohtsubo W, Strassert JFH, Köhler T, Mikaelyan A, Gregor I, McHardy AC, Tringe SGreen, Hugenholtz P, Radek R, Brune A.  2016.  Candidatus Adiutrix intracellularis’, an endosymbiont of termite gut flagellates, is the first representative of a deep-branching clade of Deltaproteobacteria and a putative homoacetogen. Environmental Microbiology. 18(8):2548-2564.
Haroon MF, Thompson LR, Parks DH, Hugenholtz P, Stingl U.  2016.  A catalogue of 136 microbial draft genomes from Red Sea metagenomes. Scientific Data. 3:160050.
Yeoh YKit, Sekiguchi Y, Parks DH, Hugenholtz P.  2016.  Comparative Genomics of Candidate Phylum TM6 Suggests That Parasitism Is Widespread and Ancestral in This Lineage. Molecular Biology and Evolution. 33(4):915-927.
Yeoh YKit, Paungfoo-Lonhienne C, Dennis PG, Robinson N, Ragan MA, Schmidt S, Hugenholtz P.  2016.  The core root microbiome of sugarcanes cultivated under varying nitrogen fertilizer application. Environmental Microbiology. 18(5):1338-1351.
Paungfoo-Lonhienne C, Lonhienne TGA, Yeoh YKit, Donose BC, Webb RI, Parsons J, Liao W, Sagulenko E, Lakshmanan P, Hugenholtz P et al..  2016.  Crosstalk between sugarcane and a plant-growth promoting Burkholderia species. Scientific Reports. 6(1)
Angly FE, Pantos O, Morgan TC, Rich V, Tonin H, Bourne DG, Mercurio P, Negri AP, Tyson GW.  2016.  Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon. PeerJ. 4:e1758.
Robbins SJ, Evans PN, Esterle JS, Golding SD, Tyson GW.  2016.  The effect of coal rank on biogenic methane potential and microbial composition. International Journal of Coal Geology. 154-155:205-212.
Budden KF, Gellatly SL, Wood DLA, Cooper MA, Morrison M, Hugenholtz P, Hansbro PM.  2016.  Emerging pathogenic links between microbiota and the gut–lung axis. Nature Reviews Microbiology. 15(1):55-63.
Saleska S, Rich V, Tyson GW, Chanton J, Crill P, Li C.  2016.  Genes, isotopes, and ecosystem biogeochemistry. Dissecting methane flux at the leading edge of global change.

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