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2013
Dennis PG, Harnisch F, Yeoh YK, Tyson GW, Rabaey K. Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system. Appl Environ Microbiol. 2013. Abstract
Bragg LM, Stone G, Butler MK, Hugenholtz P, Tyson GW. Shining a Light on Dark Sequencing: Characterising Errors in Ion Torrent PGM Data. PLoS Comput Biol. 2013;9(4):e1003031. Abstract
Dennis PG, Seymour J, Kumbun K, Tyson GW. Diverse populations of lake water bacteria exhibit chemotaxis towards inorganic nutrients. ISME J. 2013. Abstract
Skennerton CT, Imelfort M, Tyson GW. Crass: identification and reconstruction of CRISPR from unassembled metagenomic data. Nucleic Acids Res. 2013. Abstract
Dennis PG, Guo K, Imelfort M, Jensen P, Tyson GW, Rabaey K. Spatial uniformity of microbial diversity in a continuous bioelectrochemical system. Bioresour Technol. 2013;129:599-605. Abstract
Bourne DG, Dennis PG, Uthicke S, Soo RM, Tyson GW, Webster N. Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. ISME J. 2013. Abstract
Carvalhais LC, Dennis PG, Badri DV, Tyson GW, Vivanco JM, Schenk PM. Activation of the jasmonic Acid plant defence pathway alters the composition of rhizosphere bacterial communities. PLoS ONE. 2013;8(2):e56457. Abstract
2012
Carvalhais LC, Dennis PG, Tyson GW, Schenk PM. Application of metatranscriptomics to soil environments. J Microbiol Methods. 2012;91(2):246-51. Abstract
Cayford BI, Dennis PG, Keller J, Tyson GW, Bond PL. High-Throughput Amplicon Sequencing Reveals Distinct Communities within a Corroding Concrete Sewer System. Appl Environ Microbiol. 2012;78(19):7160-2. Abstract
Angly FE, Willner D, Rohwer F, Hugenholtz P, Tyson GW. Grinder: a versatile amplicon and shotgun sequence simulator. Nucleic acids research. 2012. Abstract
Bragg L, Stone G, Imelfort M, Hugenholtz P, Tyson GW. Fast, accurate error-correction of amplicon pyrosequences using Acacia. Nat Methods. 2012;9(5):425-6.
2011
Skennerton CT, Angly FE, Breitbart M, Bragg L, He S, McMahon KD, et al. Phage Encoded H-NS: A Potential Achilles Heel in the Bacterial Defence System. PLoS ONE. 2011;6(5):e20095. Abstract
2010
Shi Y, Tyson GW, Eppley JM, Delong EF. Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean. The ISME journal. 2010. Abstract
Yilmaz S, Haroon MF, Rabkin BA, Tyson GW, Hugenholtz P. Fixation-free fluorescence in situ hybridization for targeted enrichment of microbial populations. ISME J. 2010;4(10):1352-6. Abstract
Martinez A, Tyson GW, Delong EF. Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses. Environ Microbiol. 2010;12(1):222-38. Abstract
2009
Shi Y, Tyson GW, Delong EF. Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column. Nature. 2009;459(7244):266-9. Abstract
Baker BJ, Tyson GW, Goosherst L, Banfield JF. Insights into the diversity of eukaryotes in acid mine drainage biofilm communities. Appl Environ Microbiol. 2009;75(7):2192-9. Abstract
2008
Hugenholtz P, Tyson GW. Microbiology: metagenomics. Nature. 2008;455(7212):481-3.
Frias-Lopez J, Shi Y, Tyson GW, Coleman ML, Schuster SC, Chisholm SW, et al. Microbial community gene expression in ocean surface waters. Proc Natl Acad Sci USA. 2008;105(10):3805-10. Abstract
Tyson GW, Banfield JF. Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses. Environ Microbiol. 2008;10(1):200-7. Abstract
2007
Eppley JM, Tyson GW, Getz WM, Banfield JF. Genetic exchange across a species boundary in the archaeal genus ferroplasma. Genetics. 2007;177(1):407-16. Abstract
Lo I, Denef VJ, Verberkmoes NC, Shah MB, Goltsman D, DiBartolo G, et al. Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria. Nature. 2007;446(7135):537-41. Abstract
Lo I, Denef VJ, Verberkmoes NC, Shah MB, Goltsman D, DiBartolo G, et al. Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria. Nature. 2007;446(7135):537-41. Abstract
2012
Carvalhais LC, Dennis PG, Tyson GW, Shenk P. Rhizosphere metatranscriptomics: challenges and opportunities. In: de Bruijn FJ, editor. Molecular Microbial Ecology of the Rhizosphere. New Jersey: Wiley-Blackwell; 2012.
Carvalhais LC, Dennis PG, Tyson GW, Shenk P. Applying metatranscriptomics to soil environments. Journal of Microbiological Methods. 2012;91:246-51.