Publications
Export 123 results:
Lineages of acidophilic archaea revealed by community genomic analysis. Science. 2006;314(5807):1933-5. Abstract
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities. Nat Biotechnol. 2006;24(10):1263-9. Abstract
An experimental metagenome data management and analysis system. Bioinformatics. 2006;22(14):e359-67. Abstract
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol. 2006;72(7):5069-72. Abstract
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes. Nucleic Acids Res. 2006;34(Web Server issue):W394-9. Abstract
Numbers and locations of native bacteria on field-grown wheat roots quantified by fluorescence in situ hybridization (FISH). Environ Microbiol. 2006;8(5):871-84. Abstract
Non-sulfate-reducing, syntrophic bacteria affiliated with desulfotomaculum cluster I are widely distributed in methanogenic environments. Appl Environ Microbiol. 2006;72(3):2080-91. Abstract
The integrated microbial genomes (IMG) system. Nucleic Acids Res. 2006;34(Database issue):D344-8. Abstract
The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide. Nucleic Acids Res. 2006;34(Database issue):D332-4. Abstract
Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community. Appl Environ Microbiol. 2005;71(10):6319-24. Abstract
Comparative metagenomics of microbial communities. Science. 2005;308(5721):554-7. Abstract
SNP-VISTA: an interactive SNP visualization tool. BMC Bioinformatics. 2005;6:292. Abstract
Chthoniobacter flavus gen. nov., sp. nov., the first pure-culture representative of subdivision two, Spartobacteria classis nov., of the phylum Verrucomicrobia. Appl Environ Microbiol. 2004;70(10):5875-81. Abstract
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics. 2004;20(14):2317-9. Abstract
Liquid serial dilution is inferior to solid media for isolation of cultures representative of the phylum-level diversity of soil bacteria. Appl Environ Microbiol. 2004;70(7):4363-6. Abstract
Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature. 2004;428(6978):37-43. Abstract
Laboratory cultivation of widespread and previously uncultured soil bacteria. Appl Environ Microbiol. 2003;69(12):7210-5. Abstract
Extremely acidophilic protists from acid mine drainage host Rickettsiales-lineage endosymbionts that have intervening sequences in their 16S rRNA genes. Appl Environ Microbiol. 2003;69(9):5512-8. Abstract
Fermentation of glycolate by a pure culture of a strictly anaerobic gram-positive bacterium belonging to the family Lachnospiraceae. Arch Microbiol. 2003;179(5):321-8. Abstract
PCR detection of Clostridium chauvoei in pure cultures and in formalin-fixed, paraffin-embedded tissues. Vet Microbiol. 2003;91(2-3):239-48. Abstract
Kinetic and phylogenetic characterization of an anaerobic dechlorinating microbial community. Microbiology (Reading, Engl). 2003;149(Pt 2):459-69. Abstract
Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys. Environ Microbiol. 2002;4(11):654-66. Abstract
