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2012
Rosewarne CP, Cheung JL, Smith WJ, Evans PN, Tomkins NW, Denman SE, et al. Draft genome sequence of Treponema sp. strain JC4, a novel spirochete isolated from the bovine rumen. J Bacteriol. 2012;194(15):4130. Abstract
2011
Samsudin AA, Evans PN, Wright A-, Al Jassim R. Molecular diversity of the foregut bacteria community in the dromedary camel (Camelus dromedarius). Environ Microbiol. 2011;13(11):3024-35. Abstract
Webster NS, Cobb RE, Soo RM, Anthony SL, Battershill CN, Whalan S, et al. Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Mar Biotechnol. 2011;13(2):296-304. Abstract
Erpenbeck D, Voigt O, Adamski M, Woodcroft BJ, Hooper JN, Wörheide G, et al. NUMTs in the sponge genome reveal conserved transposition mechanisms in metazoans. Mol Biol Evol. 2011;28(1):1-5. Abstract
2010
Pope PB, Denman SE, Jones M, Tringe SG, Barry K, Malfatti SA, et al. Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores. Proc Natl Acad Sci USA. 2010;107(33):14793-8. Abstract
Koay A, Woodcroft BJ, Petrie EJ, Yue H, Emanuelle S, Bieri M, et al. AMPK beta subunits display isoform specific affinities for carbohydrates. FEBS Lett. 2010;584(15):3499-503. Abstract
Allgaier M, Reddy A, Park JI, Ivanova N, D'haeseleer P, Lowry S, et al. Targeted discovery of glycoside hydrolases from a switchgrass-adapted compost community. PLoS ONE. 2010;5(1):e8812. Abstract
Martinez A, Tyson GW, Delong EF. Widespread known and novel phosphonate utilization pathways in marine bacteria revealed by functional screening and metagenomic analyses. Environ Microbiol. 2010;12(1):222-38. Abstract
2009
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, et al. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea. Nature. 2009;462(7276):1056-60. Abstract
Imelfort M, Edwards D. De novo sequencing of plant genomes using second-generation technologies. Brief Bioinformatics. 2009;10(6):609-18. Abstract
Herlemann DP, Geissinger O, Ikeda-Ohtsubo W, Kunin V, Sun H, Lapidus A, et al. Genomic analysis of "Elusimicrobium minutum," the first cultivated representative of the phylum "Elusimicrobia" (formerly termite group 1). Appl Environ Microbiol. 2009;75(9):2841-9. Abstract
Gardiner DL, Woodcroft BJ, Dixon MW, Ralph SA, Trenholme KR. REX1 and Pf62: are they one and the same? Parasitol Res. 2009;104(5):967-8.
Baker BJ, Tyson GW, Goosherst L, Banfield JF. Insights into the diversity of eukaryotes in acid mine drainage biofilm communities. Appl Environ Microbiol. 2009;75(7):2192-9. Abstract
Tschöp MH, Hugenholtz P, Karp CL. Getting to the core of the gut microbiome. Nat Biotechnol. 2009;27(4):344-6.
Evans PN, Hinds LA, Sly LI, McSweeney CS, Morrison M, Wright A-. Community composition and density of methanogens in the foregut of the Tammar wallaby (Macropus eugenii). Appl Environ Microbiol. 2009;75(8):2598-602. Abstract
Soo RM, Wood SA, Grzymski JJ, McDonald IR, Cary CS. Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica. Environ Microbiol. 2009;11(3):715-28. Abstract
2008
Vega Thurber RL, Barott KL, Hall D, Liu H, Rodriguez-Mueller B, Desnues C, et al. Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa. Proc Natl Acad Sci USA. 2008;105(47):18413-8. Abstract
Wrighton KC, Agbo P, Warnecke F, Weber KA, Brodie EL, DeSantis TZ, et al. A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells. ISME J. 2008;2(11):1146-56. Abstract
Peterson BS, Warnecke F, Madejska J, McMahon KD, Hugenholtz P. Environmental distribution and population biology of Candidatus Accumulibacter, a primary agent of biological phosphorus removal. Environ Microbiol. 2008;10(10):2692-703. Abstract
Dalevi D, Ivanova NN, Mavromatis K, Hooper SD, Szeto E, Hugenholtz P, et al. Annotation of metagenome short reads using proxygenes. Bioinformatics. 2008;24(16):i7-13. Abstract
Blank LM, Hugenholtz P, Nielsen LK. Evolution of the hyaluronic acid synthesis (has) operon in Streptococcus zooepidemicus and other pathogenic streptococci. J Mol Evol. 2008;67(1):13-22. Abstract
Breitbart M, Haynes M, Kelley S, Angly FE, Edwards RA, Felts B, et al. Viral diversity and dynamics in an infant gut. Res Microbiol. 2008;159(5):367-73. Abstract
Desnues C, Rodriguez-Brito B, Rayhawk S, Kelley S, Tran T, Haynes M, et al. Biodiversity and biogeography of phages in modern stromatolites and thrombolites. Nature. 2008;452(7185):340-3. Abstract
Kunin V, He S, Warnecke F, Peterson BS, Martin HG, Haynes M, et al. A bacterial metapopulation adapts locally to phage predation despite global dispersal. Genome Res. 2008;18(2):293-7. Abstract
Tyson GW, Banfield JF. Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses. Environ Microbiol. 2008;10(1):200-7. Abstract