Found 360 results
2012
Godoy-Vitorino F, Goldfarb KC, Karaoz U, Leal S, Garcia-Amado MA, Hugenholtz P, Tringe SG, Brodie EL, Dominguez-Bello MGloria.  2012.  Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows. The ISME Journal. 6(3):531-541.
Willner D, Daly JN, Whiley D, Grimwood K, Wainwright CE, Hugenholtz P.  2012.  Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples. PLoS ONE. 7(4):e34605.
Willner D, Daly JN, Whiley D, Grimwood K, Wainwright CE, Hugenholtz P.  2012.  Comparison of DNA extraction methods for microbial community profiling with an application to pediatric bronchoalveolar lavage samples.. PloS one. 7:e34605.
Copeland A, Gu W, Yasawong M, Lapidus A, Lucas S, Deshpande S, Pagani I, Tapia R, Cheng J-F, Goodwin LA et al..  2012.  Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1T) from a deep-sea hydrothermal vent chimney. Standards in Genomic Sciences. 6(1):21-30.
Copeland A, Zhang X, Misra M, Lapidus A, Nolan M, Lucas S, Deshpande S, Cheng J-F, Tapia R, Goodwin LA et al..  2012.  Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T). Standards in Genomic Sciences. 6(2):145-154.
Huntemann M, Teshima H, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Tapia R, Goodwin LA et al..  2012.  Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1T). Standards in Genomic Sciences. 6(2):185-193.
Anderson I, Chertkov O, Chen A, Saunders E, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F et al..  2012.  Complete genome sequence of the moderately thermophilic mineral-sulfide-oxidizing firmicute Sulfobacillus acidophilus type strain (NALT). Standards in Genomic Sciences. 6(3):293-303.
Copeland A, Zeytun A, Yassawong M, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Han C, Tapia R et al..  2012.  Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRPT). Standards in Genomic Sciences. 6(2):240-250.
Han C, Kotsyurbenko O, Chertkov O, Held B, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F et al..  2012.  Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1T). Standards in Genomic Sciences. 6(1):94-103.
Abt B, Han C, Scheuner C, Lu M, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F et al..  2012.  Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T) reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta. Standards in Genomic Sciences. 6(2):194-209.
Anderson I, Saunders E, Lapidus A, Nolan M, Lucas S, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R et al..  2012.  Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T). Standards in Genomic Sciences. 6(2):155-164.
Lundberg DS, Lebeis SL, Paredes SHerrera, Yourstone S, Gehring J, Malfatti S, Tremblay J, Engelbrektson A, Kunin V, del Rio TGlavina et al..  2012.  Defining the core Arabidopsis thaliana root microbiome. Nature. 488(7409):86-90.
Lundberg DS, Lebeis SL, Paredes SHerrera, Yourstone S, Gehring J, Malfatti S, Tremblay J, Engelbrektson A, Kunin V, Del Rio TGlavina et al..  2012.  Defining the core Arabidopsis thaliana root microbiome.. Nature. 488:86-90.
Bragg L, Stone G, Imelfort M, Hugenholtz P, Tyson GW.  2012.  Fast, accurate error-correction of amplicon pyrosequences using Acacia.. Nature methods. 9:425-6.
Riedel T, Held B, Nolan M, Lucas S, Lapidus A, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R et al..  2012.  Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282T). Standards in Genomic Sciences. 7(1):107-119.
Anderson I, Munk C, Lapidus A, Nolan M, Lucas S, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R et al..  2012.  Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8T). Standards in Genomic Sciences. 7(2):210-220.
Anderson I, Held B, Lapidus A, Nolan M, Lucas S, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R et al..  2012.  Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T). Standards in Genomic Sciences. 6(2):174-184.
Göker M, Saunders E, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Han C, Tapia R et al..  2012.  Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314T). Standards in Genomic Sciences. 6(2):230-239.
Riedel T, Held B, Nolan M, Lucas S, Lapidus A, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R et al..  2012.  Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801T). Standards in Genomic Sciences. 7(1):120-130.
Estrada K, Styrkarsdottir U, Evangelou E, Hsu Y-H, Duncan EL, Ntzani EE, Oei L, Albagha OME, Amin N, Kemp JP et al..  2012.  Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture. Nature Genetics. 44(5):491-501.
Angly FE, Willner D, Rohwer F, Hugenholtz P, Tyson GW.  2012.  Grinder: a versatile amplicon and shotgun sequence simulator. Nucleic Acids Research. 40(12):e94-e94.
Angly FE, Willner D, Rohwer F, Hugenholtz P, Tyson GW.  2012.  Grinder: a versatile amplicon and shotgun sequence simulator.. Nucleic acids research.
Cayford BI, Dennis PG, Keller J, Tyson GW, Bond PL.  2012.  High-Throughput Amplicon Sequencing Reveals Distinct Communities within a Corroding Concrete Sewer System. Applied and Environmental Microbiology. 78(19):7160-7162.
Cayford BI, Dennis P.G, Keller J, Tyson GW, Bond PL.  2012.  High-Throughput Amplicon Sequencing Reveals Distinct Communities within a Corroding Concrete Sewer System.. Applied and environmental microbiology. 78:7160-2.
Werner JJ, Koren O, Hugenholtz P, DeSantis TZ, Walters WA, J Caporaso G, Angenent LT, Knight R, Ley RE.  2012.  Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys. The ISME Journal. 6(1):94-103.

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