Found 321 results
2016
Barr JJ, Dutilh BE, Skennerton CT, Fukushima T, Hastie ML, Gorman JJ, Tyson GW, Bond PL.  2016.  Metagenomic and metaproteomic analyses of Accumulibacter phosphatis-enriched floccular and granular biofilm. Environmental Microbiology. 18(1):273-287.
Vavourakis CD, Ghai R, Rodriguez-Valera F, Sorokin DY, Tringe SG, Hugenholtz P, Muyzer G.  2016.  Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines. Frontiers in Microbiology. 7
Vanwonterghem I, Evans PN, Parks DH, Jensen PD, Woodcroft B.J., Hugenholtz P, Tyson GW.  2016.  Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota. Nature Microbiology. 1:16170.
Schofield BJ, Skarshewski A, Lachner N, Ouwerkerk D, Klieve AV, Dart P, Hugenholtz P.  2016.  Near complete genome sequence of the animal feed probiotic, Bacillus amyloliquefaciens H57. Standards in Genomic Sciences. 11(1)
Strong P, Laycock B, Mahamud S, Jensen P, Lant P, Tyson GW, Pratt S.  2016.  The Opportunity for High-Performance Biomaterials from Methane. Microorganisms. 4(1):11.
Woodcroft B.J., Boyd JA, Tyson GW.  2016.  OrfM: A fast open reading frame predictor for metagenomic data.. Bioinformatics (Oxford, England).
Skennerton CT, Haroon MF, Briegel A, Shi J, Jensen GJ, Tyson GW, Orphan VJ.  2016.  Phylogenomic analysis of Candidatus ‘Izimaplasma’ species: free-living representatives from a Tenericutes clade found in methane seeps. The ISME Journal.
Rahman NAbdul, Parks DH, Vanwonterghem I, Morrison M, Tyson GW, Hugenholtz P.  2016.  A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres. Frontiers in Microbiology. 6
Rinke C, Low S, Woodcroft B.J., Raina J-B, Skarshewski A, Le XH, Butler MK, Stocker R, Seymour J, Tyson GW et al..  2016.  Validation of picogram- and femtogram-input DNA libraries for microscale metagenomics. PeerJ. 4:e2486.
2015
Kao-Kniffin J., Woodcroft B.J., Carver S.M., Bockheim J.G., Handelsman J., Tyson GW, Hinkel K.M., Mueller C.W..  2015.  Archaeal and bacterial communities across a chronosequence of drained lake basins in arctic alaska. Scientific Reports. 5:18165.
Soo RM, Woodcroft B.J., Parks DH, Tyson GW, Hugenholtz P.  2015.  Back from the dead; the curious tale of the predatory cyanobacterium Vampirovibrio chlorellavorus.. PeerJ. 3:e968.
Parks DH, Imelfort M, Skennerton CT, Hugenholtz P, Tyson GW.  2015.  CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.. Genome research.
Tout J, Jeffries TC, Petrou K, Tyson GW, Webster NS, Garren M, Stocker R, Ralph PJ, Seymour JR.  2015.  Chemotaxis by natural populations of coral reef bacteria. The ISME Journal. 9(8):1764-1777.
Wang JTH, Daly JN, Willner DL, Patil J, Hall RA, Schembri MA, Tyson GW, Hugenholtz P.  2015.  Do you kiss your mother with that mouth? An authentic large-scale undergraduate research experience in mapping the human oral microbiome. Journal of microbiology & biology education. 16:50-60.
Skennerton CT, Barr JJ, Slater FR, Bond PL, Tyson GW.  2015.  Expanding our view of genomic diversity in C andidatus  Accumulibacter clades. Environmental Microbiology. 17(5):1574-1585.
Sekiguchi Y, Ohashi A, Parks DH, Yamauchi T, Tyson GW, Hugenholtz P.  2015.  First genomic insights into members of a candidate bacterial phylum responsible for wastewater bulking.. PeerJ. 3:e740.
Whitman WB, Woyke T, Klenk H-P, Zhou Y, Lilburn TG, Beck BJ, De Vos P, Vandamme P, Eisen JA, Garrity G et al..  2015.  Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains. Standards in Genomic Sciences. 10(1)
Pantos O, Bongaerts P, Dennis PG, Tyson GW, Hoegh-Guldberg O.  2015.  Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix. The ISME Journal. 9(9):1916-1927.
Hu S, Zeng RJ, Haroon MF, Keller J, Lant PA, Tyson GW, Yuan Z.  2015.  A laboratory investigation of interactions between denitrifying anaerobic methane oxidation (DAMO) and anammox processes in anoxic environments.. Scientific reports. 5:8706.
Evans PN, Parks DH, Chadwick GL, Robbins SJ, Orphan VJ, Golding SD, Tyson GW.  2015.  Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics.. Science (New York, N.Y.). 350:434-8.
Rahman NAbdul, Parks DH, Willner DL, Engelbrektson AL, Goffredi SK, Warnecke F, Scheffrahn RH, Hugenholtz P.  2015.  A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes.. Microbiome. 3:5.
Paungfoo-Lonhienne C, Yeoh YKit, Kasinadhuni NRup Pinaki, Lonhienne TGA, Robinson N, Hugenholtz P, Ragan MA, Schmidt S.  2015.  Nitrogen fertilizer dose alters fungal communities in sugarcane soil and rhizosphere.. Scientific reports. 5:8678.
Voolstra CRobert, Miller DJohn, Ragan MA, Hoffmann A, Hoegh-Guldberg O, Bourne D, Ball E, Ying H, Foret S, Takahashi S et al..  2015.  The ReFuGe 2020 Consortium—using “omics” approaches to explore the adaptability and resilience of coral holobionts to environmental change. Frontiers in Marine Science.
Patil SA, Arends JBA, Vanwonterghem I, van Meerbergen J, Guo K, Tyson GW, Rabaey K.  2015.  Selective Enrichment Establishes a Stable Performing Community for Microbial Electrosynthesis of Acetate from CO 2. Environmental Science & Technology. 49(14):8833-8843.
Vanwonterghem I, Jensen PD, Rabaey K, Tyson GW.  2015.  Temperature and solids retention time control microbial population dynamics and volatile fatty acid production in replicated anaerobic digesters.. Scientific reports. 5:8496.

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