Found 321 results
2013
Carvalhais LC, Dennis PG, Badri DV, Tyson GW, Vivanco JM, Schenk PM.  2013.  Activation of the Jasmonic Acid Plant Defence Pathway Alters the Composition of Rhizosphere Bacterial Communities. PLoS ONE. 8(2):e56457.
Haroon MF, Hu S, Shi Y, Imelfort M, Keller J, Hugenholtz P, Yuan Z, Tyson GW.  2013.  Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage.. Nature.
Flowers JJ, He S, Malfatti S, Del Rio TGlavina, Tringe SG, Hugenholtz P, McMahon KD.  2013.  Comparative genomics of two ‘Candidatus Accumulibacter’ clades performing biological phosphorus removal. The ISME Journal. 7(12):2301-2314.
Stackebrandt E, Zeytun A, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Tapia R, Goodwin LA et al..  2013.  Complete genome sequence of Coriobacterium glomerans type strain (PW2T) from the midgut of Pyrrhocoris apterus L. (red soldier bug). Standards in Genomic Sciences. 8(1):15-25.
Liolos K, Abt B, Scheuner C, Teshima H, Held B, Lapidus A, Nolan M, Lucas S, Deshpande S, Cheng J-F et al..  2013.  Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692T) from the alkaline Lake Magadi in the East African Rift. Standards in Genomic Sciences. 8(2):165-176.
Mavromatis K, Stackebrandt E, Held B, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Tapia R et al..  2013.  Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT). Standards in Genomic Sciences. 8(1):47-57.
Deng L., Gregory A., Yilmaz S., Poulos B.T, Hugenholtz P., Sullivan M.B.  2013.  Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging. mBio. 3(6):e00373-12-e00373-12.
Bourne DG, Dennis PG, Uthicke S, Soo RM, Tyson GW, Webster N.  2013.  Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. The ISME Journal. 7(7):1452-1458.
Skennerton CT, Imelfort M, Tyson GW.  2013.  Crass: identification and reconstruction of CRISPR from unassembled metagenomic data.. Nucleic acids research.
Braff WA, Willner D, Hugenholtz P, Rabaey K, Buie CR.  2013.  Dielectrophoresis-based discrimination of bacteria at the strain level based on their surface properties.. PloS one. 8:e76751.
Dennis PG, Seymour J, Kumbun K, Tyson GW.  2013.  Diverse populations of lake water bacteria exhibit chemotaxis towards inorganic nutrients.. The ISME journal.
Pervin HM, Dennis PG, Lim HJ, Tyson GW, Batstone DJ, Bond PL.  2013.  Drivers of microbial community composition in mesophilic and thermophilic temperature-phased anaerobic digestion pre-treatment reactors. Water Research. 47(19):7098-7108.
Dennis PG, Harnisch F, Yeoh YKit, Tyson GW, Rabaey K.  2013.  Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system.. Applied and environmental microbiology.
Haroon MF, Hu S, Shi Y, Imelfort M, Keller J, Hugenholtz P, Yuan Z, Tyson GW.  2013.  Erratum: Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage. Nature. 501(7468):578-578.
Willner D, Hugenholtz P.  2013.  From deep sequencing to viral tagging: Recent advances in viral metagenomics.. BioEssays : news and reviews in molecular, cellular and developmental biology.
Dove SG, Kline DI, Pantos O, Angly FE, Tyson GW, Hoegh-Guldberg O.  2013.  Future reef decalcification under a business-as-usual CO2 emission scenario.. Proceedings of the National Academy of Sciences of the United States of America. 110:15342-7.
Anderson I, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R, Goodwin LA et al..  2013.  Genome sequence of Frateuria aurantia type strain (Kondô 67T), a xanthomonade isolated from Lilium auratium Lindl.. Standards in Genomic Sciences. 9(1):83-92.
Stackebrandt E, Chertkov O, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Tapia R, Goodwin LA et al..  2013.  Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva. Standards in Genomic Sciences. 8(2):228-238.
Palaniappan K, Meier-Kolthoff JP, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TGlavina, Cheng J-F, Han C, Tapia R et al..  2013.  Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701T) and emended description of the genus Thermanaerovibrio. Standards in Genomic Sciences. 9(1):57-70.
Huntemann M, Stackebrandt E, Held B, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng J-F, Tapia R, Goodwin LA et al..  2013.  Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055T). Standards in Genomic Sciences. 8(2):177-187.
Albertsen M, Hugenholtz P, Skarshewski A, Nielsen KL, Tyson GW, Nielsen PH.  2013.  Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes.. Nature biotechnology. 31:533-8.
Stackebrandt E, Chertkov O, Lapidus A, Nolan M, Lucas S, Han C, Cheng J-F, Tapia R, Goodwin LA, Bruce D et al..  2013.  High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T). Standards in Genomic Sciences. 8(1):37-46.
Rinke C, Schwientek P, Sczyrba A, Ivanova NN, Anderson IJ, Cheng J-F, Darling A, Malfatti S, Swan BK, Gies EA et al..  2013.  Insights into the phylogeny and coding potential of microbial dark matter.. Nature.
Haroon MF, Skennerton CT, Steen JA, Lachner N, Hugenholtz P, Tyson GW.  2013.  In-solution fluorescence in situ hybridization and fluorescence-activated cell sorting for single cell and population genome recovery.. Methods in enzymology. 531:3-19.

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